Host Protein General Information (ID: PT0711)
  Protein Name
Parkinson disease protein 7 (PARK7)
  Gene Name
PARK7
  Host Species
Homo sapiens
  Uniprot Entry Name
PARK7_HUMAN
  Protein Families
Peptidase C56 family
  EC Number
3.1.2.-; 3.5.1.-; 3.5.1.124
  Subcellular Location
Cytoplasm and Cytosol; Plasma membrane
  External Link
NCBI Gene ID
11315
Uniprot ID
Q99497
Ensembl ID
ENSG00000116288
HGNC ID
HGNC:16369
  Function in Host
Multifunctional protein with controversial molecular functionwhich plays an important role in cell protection against oxidativestress and cell death acting as oxidative stress sensor and redox-sensitive chaperone and protease. It is involved in neuroprotectivemechanisms like the stabilization of NFE2L2 and PINK1 proteins, malefertility as a positive regulator of androgen signaling pathway as wellas cell growth and transformation through, for instance, the modulationof NF-kappa-B signaling pathway. Has been described as a protein and nucleotide deglycase that catalyzesthe deglycation of the Maillard adducts formed between amino groups ofproteins or nucleotides and reactive carbonyl groups of glyoxals. But this function is rebuted byother works. As a protein deglycase, repairs methylglyoxal- and glyoxal-glycated proteins, and releasesrepaired proteins and lactate or glycolate, respectively. Deglycatescysteine, arginine and lysine residues in proteins, and thusreactivates these proteins by reversing glycation by glyoxals. Acts onearly glycation intermediates (hemithioacetals and aminocarbinols), preventing the formation of advanced glycation endproducts (AGE) thatcause irreversible damage. Also functions as a nucleotide deglycase able torepair glycated guanine in the free nucleotide pool (GTP, GDP, GMP, dGTP) and in DNA and RNA. Is thus involved in a major nucleotide repairsystem named guanine glycation repair (GG repair), dedicated toreversing methylglyoxal and glyoxal damage via nucleotide sanitizationand direct nucleic acid repair. Protects histonesfrom adduction by methylglyoxal, controls the levels of methylglyoxal-derived argininine modifications on chromatin. Ableto remove the glycations and restore histone 3, histone glycationdisrupts both local and global chromatin architecture by alteringhistone-DNA interactions as well as histone acetylation andubiquitination levels. Displays avery low glyoxalase activity that may reflect its deglycase activity. Eliminateshydrogen peroxide and protects cells against hydrogen peroxide-inducedcell death. Required for correct mitochondrialmorphology and function as well as for autophagy of dysfunctionalmitochondria. Plays a role inregulating expression or stability of the mitochondrial uncouplingproteins SLC25A14 and SLC25A27 in dopaminergic neurons of thesubstantia nigra pars compacta and attenuates the oxidative stressinduced by calcium entry into the neurons via L-type channels duringpacemaking. Regulates astrocyte inflammatoryresponses, may modulate lipid rafts-dependent endocytosis in astrocytesand neuronal cells. In pancreatic islets, involved inthe maintenance of mitochondrial reactive oxygen species (ROS) levelsand glucose homeostasis in an age- and diet dependent manner. Protectspancreatic beta cells from cell death induced by inflammatory andcytotoxic setting. Binds to a number of mRNAscontaining multiple copies of GG or CC motifs and partially inhibitstheir translation but dissociates following oxidative stress. Metal-binding protein able to bind copper as well astoxic mercury ions, enhances the cell protection mechanism againstinduced metal toxicity. In macrophages, interactswith the NADPH oxidase subunit NCF1 to direct NADPH oxidase-dependentROS production, and protects against sepsis. [1-15]
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  Related KEGG Pathway
Parkinson disease hsa05012            Pathway Map 
Pathways of neurodegeneration - multiple diseases hsa05022            Pathway Map 
  3D Structure

Function of This Protein During Virus Infection
Virus NameSARS-COV-2 Protein Function Anti-viral [16]
Infected TissueLung Infection Time7-9 Days
Infected CellCalu-3 Cells (Human epithelial cell line) Cellosaurus IDCVCL_0609 
Method DescriptionTo detect the role of host protein PARK7 in viral infection, PARK7 protein knockout Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen.
ResultsIt is reported that knockout of PARK7 increases SARS-CoV-2 RNA levels compared with control group.

 Full List of Virus RNA Interacting with This Protien
            RNA Region: Not Specified Virus Region (hCoV-19/France/IDF-220-95/2020 )
              RNA Region Details RNA Info Click to show the detail information of this RNA binding region [17]
              Strains Name
hCoV-19/France/IDF-220-95/2020
              RNA Binding Region
Not Specified Virus Region
              Virus Name
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
              Interaction Type Direct interaction
              Infection Cells HEK293 Cells (Human embryonic kidney cell)  (CVCL_0045 )
              Cell Originated Tissue Kidney
              Infection Time 48 h
              Interaction Score SAINT score ≥ 0.79
              Method Description comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS)

Differential Gene Expression During SARS-COV-2 Infection
GEO Accession: GSE152641
Sample Type: Blood
Samples Details: Healthy Control: 24; COVID-19: 62
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE162835
Sample Type: Nasopharyngeal Swabs
Samples Details: COVID-19 (Mild Symptoms): 37; COVID-19 (Moderate Symptoms): 10; COVID-19 (Severe Symptoms): 3
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE175779
Sample Type: Human Bronchial Epithelial Cells
Samples Details: Healthy Control: 4 (0, 24, 48, 72 and 96 h); COVID-19: 4 (24, 48, 72 and 96 h)
Platform: GPL18573 Illumina NextSeq 500
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Protein Phosphorylation after Virus Infection
S57 [18]
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Protein Sequence Information
MASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLKD
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References
1 Parkinson s disease-related DJ-1 functions in thiol quality control against aldehyde attack in vitro. Sci Rep. 2017 Oct 9;7(1):12816.
2 The crystal structure of DJ-1, a protein related to male fertility and Parkinson s disease. J Biol Chem. 2003 Aug 15;278(33):31380-4.
3 The apparent deglycase activity of DJ-1 results from the conversion of free methylglyoxal present in fast equilibrium with hemithioacetals and hemiaminals. J Biol Chem. 2019 Dec 6;294(49):18863-18872.
4 Guanine glycation repair by DJ-1/Park7 and its bacterial homologs. Science. 2017 Jul 14;357(6347):208-211.
5 Evidence Against a Role for the Parkinsonism-associated Protein DJ-1 in Methylglyoxal Detoxification. J Biol Chem. 2017 Jan 13;292(2):685-690.
6 The Parkinsonism-associated protein DJ-1/Park7 prevents glycation damage in human keratinocyte. Biochem Biophys Res Commun. 2016 Apr 22;473(1):87-91.
7 Parkinsonism-associated protein DJ-1/Park7 is a major protein deglycase that repairs methylglyoxal- and glyoxal-glycated cysteine, arginine, and lysine residues. J Biol Chem. 2015 Jan 16;290(3):1885-97.
8 DJ-1 enhances cell survival through the binding of Cezanne, a negative regulator of NF-kappaB. J Biol Chem. 2011 Feb 11;286(6):4098-106.
9 Parkinson disease protein DJ-1 converts from a zymogen to a protease by carboxyl-terminal cleavage. Hum Mol Genet. 2010 Jun 15;19(12):2395-408.
10 Parkin, PINK1, and DJ-1 form a ubiquitin E3 ligase complex promoting unfolded protein degradation. J Clin Invest. 2009 Mar;119(3):650-60.
11 Mitochondrial localization of DJ-1 leads to enhanced neuroprotection. J Neurosci Res. 2009 Jan;87(1):123-9.
12 DJ-1, a cancer- and Parkinson s disease-associated protein, stabilizes the antioxidant transcriptional master regulator Nrf2. Proc Natl Acad Sci USA. 2006 Oct 10;103(41):15091-6.
13 DJ-1 is a redox-dependent molecular chaperone that inhibits alpha-synuclein aggregate formation. PLoS Biol. 2004 Nov;2(11):e362.
14 DJ-1 has a role in antioxidative stress to prevent cell death. EMBO Rep. 2004 Feb;5(2):213-8.
15 DJBP: a novel DJ-1-binding protein, negatively regulates the androgen receptor by recruiting histone deacetylase complex, and DJ-1 antagonizes this inhibition by abrogation of this complex. Mol Cancer Res. 2003 Feb;1(4):247-61.
16 Genome-wide CRISPR screens identify GATA6 as a proviral host factor for SARS-CoV-2 via modulation of ACE2. Nat Commun. 2022 Apr 25;13(1):2237.
17 Characterization and functional interrogation of the SARS-CoV-2 RNA interactome. Cell Rep. 2022 Apr 26;39(4):110744.
18 Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV. Nature. 2021 Jun;594(7862):246-252.