Host Protein General Information (ID: PT0096)
  Protein Name
60S ribosomal protein L12 (RPL11)
  Gene Name
RPL11
  Host Species
Homo sapiens
  Uniprot Entry Name
RL11_HUMAN
  Protein Families
Universal ribosomal protein uL5 family
  Subcellular Location
Nucleus; nucleolus Cytoplasm
  External Link
NCBI Gene ID
6135
Uniprot ID
P62913
Ensembl ID
ENSG00000142676
HGNC ID
HGNC:10301
  Function in Host
Component of the ribosome, a large ribonucleoprotein complexresponsible for the synthesis of proteins in the cell. The smallribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates theencoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalyticsite termed the peptidyl transferase center (PTC), which catalyzes theformation of peptide bonds, thereby polymerizing the amino acidsdelivered by tRNAs into a polypeptide chain. The nascent polypeptidesleave the ribosome through a tunnel in the LSU and interact withprotein factors that function in enzymatic processing, targeting, andthe membrane insertion of nascent chains at the exit of the ribosomaltunnel. As part of the 5S RNP/5S ribonucleoprotein particle it is anessential component of the LSU, required for its formation and thematuration of rRNAs. It also couples ribosome biogenesis to p53/TP53activation. As part of the 5S RNP it accumulates in the nucleoplasm andinhibits MDM2, when ribosome biogenesis is perturbed, mediating thestabilization and the activation of TP53. Promotesnucleolar location of PML. [1-3]
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  Related KEGG Pathway
Coronavirus disease - COVID-19 hsa05171            Pathway Map 
Ribosome hsa03010            Pathway Map 
  3D Structure

 Full List of Virus RNA Interacting with This Protien
            RNA Region: ORF10 (hCoV-19/Not Specified Virus Strain )
              RNA Region Details RNA Info Click to show the detail information of this RNA binding region [4]
              Strains Name
hCoV-19/Not Specified Virus Strain
              RNA Binding Region
ORF10
              Virus Name
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
              Infection Cells Huh7 cells (human liver cell line)  (CVCL_0336 )
              Cell Originated Tissue Liver
              Interaction Score P-value < 0.05
              Method Description RNA pull-down assays; liquid chromatography with tandem mass spectrometry (LC-MS/MS); Wilcoxon test; MS2 affinity purification coupled with liquid chromatography-mass spectrometry (MAMS)

Differential Gene Expression During SARS-COV-2 Infection
GEO Accession: GSE152641
Sample Type: Blood
Samples Details: Healthy Control: 24; COVID-19: 62
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE162835
Sample Type: Nasopharyngeal Swabs
Samples Details: COVID-19 (Mild Symptoms): 37; COVID-19 (Moderate Symptoms): 10; COVID-19 (Severe Symptoms): 3
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE175779
Sample Type: Human Bronchial Epithelial Cells
Samples Details: Healthy Control: 4 (0, 24, 48, 72 and 96 h); COVID-19: 4 (24, 48, 72 and 96 h)
Platform: GPL18573 Illumina NextSeq 500
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Potential Drug(s) that Targets This Protein
Drug Name DrunkBank ID Pubchem ID TTD ID REF
Anisomycin DB07374  253602  D07JVU  [5]

Protein Sequence Information
MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK
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References
1 The 5S RNP couples p53 homeostasis to ribosome biogenesis and nucleolar stress. Cell Rep. 2013 Oct 17;5(1):237-47.
2 Ribosomal protein L5 and L11 mutations are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients. Am J Hum Genet. 2008 Dec;83(6):769-80.
3 Characterization and analysis of posttranslational modifications of the human large cytoplasmic ribosomal subunit proteins by mass spectrometry and Edman sequencing. J Protein Chem. 2003 Apr;22(3):249-58.
4 Mapping the host protein interactome of non-coding regions in SARS-CoV-2 genome. bioRxiv. 2021 Jun; DOI:10.1101/2021.06.19.449092.
5 The current landscape of coronavirus-host protein-protein interactions. J Transl Med. 2020 Aug 18;18(1):319.