Details of Host Protein
Host Protein General Information (ID: PT0163) | |||||||||
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Protein Name |
A-kinase anchor protein 8 (AKAP-8)
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Gene Name |
AKAP8
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Host Species |
Homo sapiens
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Uniprot Entry Name |
AKAP8_HUMAN
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Protein Families |
AKAP95 family
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Subcellular Location |
Nucleus; nucleolus Cytoplasm
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External Link | |||||||||
NCBI Gene ID | |||||||||
Uniprot ID | |||||||||
Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
Anchoring protein that mediates the subcellularcompartmentation of cAMP-dependent protein kinase (PKA type II). Acts as an anchor for a PKA-signaling complex ontomitotic chromosomes, which is required for maintenance of chromosomesin a condensed form throughout mitosis. Recruits condensin complexsubunit NCAPD2 to chromosomes required for chromatin condensation; thefunction appears to be independent from PKA-anchoring. May help to deliver cyclin D/E toCDK4 to facilitate cell cycle progression. Requiredfor cell cycle G2/M transition and histone deacetylation duringmitosis. In mitotic cells recruits HDAC3 to the vicinity of chromatinleading to deacetylation and subsequent phosphorylation at 'Ser-10' ofhistone H3; in this function may act redundantly with AKAP8L. Involved in nuclear retention of RPS6KA1 upon ERKactivation thus inducing cell proliferation. May beinvolved in regulation of DNA replication by acting as scaffold forMCM2. Enhances HMT activity of the KMT2 familyMLL4/WBP7 complex and is involved in transcriptional regulation. In ateratocarcinoma cell line is involved in retinoic acid-mediatedinduction of developmental genes implicating H3 'Lys-4' methylation. May be involved in recruitment of active CASP3 tothe nucleus in apoptotic cells. May act as a carrierprotein of GJA1 for its transport to the nucleus. Mayplay a repressive role in the regulation of rDNA transcription. Preferentially binds GC-rich DNA in vitro. In cells, associates withribosomal RNA (rRNA) chromatin, preferentially with rRNA promoter andtranscribed regions. Involved in modulation of Toll-like receptor signaling. Required for the cAMP-dependent suppression ofTNF-alpha in early stages of LPS-induced macrophage activation; thefunction probably implicates targeting of PKA to NFKB1.
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3D Structure |
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Function of This Protein During Virus Infection | |||||||||
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Virus Name | SARS-COV-2 | Protein Function | Anti-viral | [7] | |||||
Infected Tissue | Lung | Infection Time | 7-9 Days | ||||||
Infected Cell | Calu-3 Cells (Human epithelial cell line) | Cellosaurus ID | CVCL_0609 | ||||||
Method Description | To detect the role of host protein AKAP8 in viral infection, AKAP8 protein knockout Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen. | ||||||||
Results | It is reported that knockout of AKAP8 increases SARS-CoV-2 RNA levels compared with control group. |
Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: 3'-UTR (hCoV-19/Not Specified Virus Strain ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [8] | |||||||
Strains Name |
hCoV-19/Not Specified Virus Strain
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RNA Binding Region |
3'-UTR
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Huh7 cells (human liver cell line); Calu-3 cells (human lung cancer cell line) (CVCL_0336;CVCL_0609 ) | ||||||||
Cell Originated Tissue | Liver; Lung | ||||||||
Interaction Score | P-value < 0.05 | ||||||||
Method Description | RNA pull-down assays; liquid chromatography with tandem mass spectrometry (LC-MS/MS); Wilcoxon test; MS2 affinity purification coupled with liquid chromatography-mass spectrometry (MAMS) |
Differential Gene Expression During SARS-COV-2 Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Protein Phosphorylation after Virus Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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S339
[9] |
Protein Sequence Information |
MDQGYGGYGAWSAGPANTQGAYGTGVASWQGYENYNYYGAQNTSVTTGATYSYGPASWEAAKANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAKINQRLDMMSKEGGRGGSGGGGEGIQDRESSFRFQPFESYDSRPCLPEHNPYRPSYSYDYEFDLGSDRNGSFGGQYSECRDPARERGSLDGFMRGRGQGRFQDRSNPGTFMRSDPFVPPAASSEPLSTPWNELNYVGGRGLGGPSPSRPPPSLFSQSMAPDYGVMGMQGAGGYDSTMPYGCGRSQPRMRDRDRPKRRGFDRFGPDGTGRKRKQFQLYEEPDTKLARVDSEGDFSENDDAAGDFRSGDEEFKGEDELCDSGRQRGEKEDEDEDVKKRREKQRRRDRTRDRAADRIQFACSVCKFRSFDDEEIQKHLQSKFHKETLRFISTKLPDKTVEFLQEYIVNRNKKIEKRRQELMEKETAKPKPDPFKGIGQEHFFKKIEAAHCLACDMLIPAQPQLLQRHLHSVDHNHNRRLAAEQFKKTSLHVAKSVLNNRHIVKMLEKYLKGEDPFTSETVDPEMEGDDNLGGEDKKETPEEVAADVLAEVITAAVRAVDGEGAPAPESSGEPAEDEGPTDTAEAGSDPQAEQLLEEQVPCGTAHEKGVPKARSEAAEAGNGAETMAAEAESAQTRVAPAPAAADAEVEQTDAESKDAVPTE
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