Details of Host Protein
Host Protein General Information (ID: PT0429) | |||||||||
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Protein Name |
Exosome complex exonuclease RRP44 (GPATCH1)
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Gene Name |
DIS3
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Host Species |
Homo sapiens
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Uniprot Entry Name |
RRP44_HUMAN
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Protein Families |
RNR ribonuclease family
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EC Number |
3.1.13.-; 3.1.26.-
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Subcellular Location |
Cytoplasm Nucleus; nucleolus Nucleus; nucleoplasm Nucleus
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External Link | |||||||||
NCBI Gene ID | |||||||||
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Ensembl ID | |||||||||
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Function in Host |
Putative catalytic component of the RNA exosome complex whichhas 3'->5' exoribonuclease activity and participates in a multitude ofcellular RNA processing and degradation events. In the nucleus, the RNAexosome complex is involved in proper maturation of stable RNA speciessuch as rRNA, snRNA and snoRNA, in the elimination of RNA processingby-products and non-coding 'pervasive' transcripts, such as antisenseRNA species and promoter-upstream transcripts (PROMPTs), and of mRNAswith processing defects, thereby limiting or excluding their export tothe cytoplasm. The RNA exosome may be involved in Ig class switchrecombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNAsubstrates. In the cytoplasm, the RNA exosome complex is involved ingeneral mRNA turnover and specifically degrades inherently unstablemRNAs containing AU-rich elements (AREs) within their 3' untranslatedregions, and in RNA surveillance pathways, preventing translation ofaberrant mRNAs. It seems to be involved in degradation of histone mRNA. DIS3 has both 3'-5' exonuclease and endonuclease activities.
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Related KEGG Pathway | |||||||||
RNA degradation | hsa03018 | Pathway Map | |||||||
3D Structure |
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Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: 5'-UTR (hCoV-19/Wuhan-Hu-1/2019 ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [1] | |||||||
Strains Name |
hCoV-19/Wuhan-Hu-1/2019
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Strains Family |
Beta (B.1.351)
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RNA Binding Region |
5'-UTR
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | HEK293 Cells (Human embryonic kidney cell) (CVCL_0045 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Infection Time | 48 h | ||||||||
Interaction Score | Prot score = 180 | ||||||||
Method Description | RNA-protein interaction detection (RaPID) assay; liquid chromatography with tandem mass spectrometry (LC-MS/MS) |