Details of Host Protein
| Host Protein General Information (ID: PT0504) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Protein Name |
Heat shock 70 kDa protein 6 (HSPA6)
|
Gene Name |
HSPA6
|
||||||
| Host Species |
Homo sapiens
|
Uniprot Entry Name |
HSP76_HUMAN
|
||||||
| Protein Families |
Heat shock protein 7. family
|
||||||||
| External Link | |||||||||
| NCBI Gene ID | |||||||||
| Uniprot ID | |||||||||
| Ensembl ID | |||||||||
| HGNC ID | |||||||||
| Function in Host |
Molecular chaperone implicated in a wide variety of cellularprocesses, including protection of the proteome from stress, foldingand transport of newly synthesized polypeptides, activation ofproteolysis of misfolded proteins and the formation and dissociation ofprotein complexes. Plays a pivotal role in the protein quality controlsystem, ensuring the correct folding of proteins, the re-folding ofmisfolded proteins and controlling the targeting of proteins forsubsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The affinityfor polypeptides is regulated by its nucleotide bound state. In theATP-bound form, it has a low affinity for substrate proteins. However, upon hydrolysis of the ATP to ADP, it undergoes a conformational changethat increases its affinity for substrate proteins. It goes throughrepeated cycles of ATP hydrolysis and nucleotide exchange, whichpermits cycles of substrate binding and release.
Click to Show/Hide
|
||||||||
| Related KEGG Pathway | |||||||||
| Antigen processing and presentation | hsa04612 |
Pathway Map
|
|||||||
| Measles | hsa05162 |
Pathway Map
|
|||||||
| Legionellosis | hsa05134 |
Pathway Map
|
|||||||
| Toxoplasmosis | hsa05145 |
Pathway Map
|
|||||||
| Protein processing in endoplasmic reticulum | hsa04141 |
Pathway Map
|
|||||||
| Spliceosome | hsa03040 |
Pathway Map
|
|||||||
| MAPK signaling pathway | hsa04010 |
Pathway Map
|
|||||||
| Endocytosis | hsa04144 |
Pathway Map
|
|||||||
| 3D Structure |
|
||||||||
| Function of This Protein During Virus Infection | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Virus Name | SARS-COV-2 | Protein Function | Pro-viral | [1] | |||||
| Infected Tissue | Lung | Infection Time | 7-9 Days | ||||||
| Infected Cell | Calu-3 Cells (Human epithelial cell line) | Cellosaurus ID | CVCL_0609 | ||||||
| Method Description | To detect the role of host protein HSPA6 in viral infection, HSPA6 protein knockout Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen. | ||||||||
| Results | It is reported that knockout of HSPA6 leads to the decreased SARS-CoV-2 RNA levels compared with control group. | ||||||||
| Full List of Virus RNA Interacting with This Protien | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RNA Region: Not Specified Virus Region (hCoV-19/England/02/2020 ) | |||||||||
| RNA Region Details |
RNA Info
Click to show the detail information of this RNA binding region
|
[2] | |||||||
| Strains Name |
hCoV-19/England/02/2020
|
||||||||
| Strains Family |
Beta (B.1.351)
|
||||||||
| RNA Binding Region |
Not Specified Virus Region
|
||||||||
| Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
|
||||||||
| Infection Cells | Calu-3 cells (Human lung cancer cell) (CVCL_0609 ) | ||||||||
| Cell Originated Tissue | Lung | ||||||||
| Infection Time | 24 h | ||||||||
| Interaction Score | P-adjust = 0.019 | ||||||||
| Method Description | UV protein-RNA crosslinking; RNA interactome capture (cRIC); RNA antisense purification coupled with mass spectrometry (RAP-MS) | ||||||||




