Details of Host Protein
Host Protein General Information (ID: PT0543) | |||||||||
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Protein Name |
Histone deacetylase complex subunit SAP18 (SAP18)
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Gene Name |
SAP18
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Host Species |
Homo sapiens
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Uniprot Entry Name |
SAP18_HUMAN
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Protein Families |
SAP18 family
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Subcellular Location |
Nucleus; Cytoplasm
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External Link | |||||||||
NCBI Gene ID | |||||||||
Uniprot ID | |||||||||
Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
Component of the SIN3-repressing complex. Enhances theability of SIN3-HDAC1-mediated transcriptional repression. Whentethered to the promoter, it can direct the formation of a repressivecomplex to core histone proteins. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splicejunction on mRNAs. The EJC is a dynamic structure consisting of coreproteins and several peripheral nuclear and cytoplasmic associatedfactors that join the complex only transiently either during EJCassembly or during subsequent mRNA metabolism. Component of the ASAPand PSAP complexes which bind RNA in a sequence-independent manner andare proposed to be recruited to the EJC prior to or during the splicingprocess and to regulate specific excision of introns in specifictranscription subsets. The ASAP complex can inhibit mRNA processingduring in vitro splicing reactions. The ASAP complex promotes apoptosisand is disassembled after induction of apoptosis. Involved in thesplicing modulation of BCL2L1/Bcl-X (and probably other apoptoticgenes); specifically inhibits the formation of proapoptotic isoformssuch as Bcl-X (S); the activity is different from the established EJCassembly and function.
[1-4]
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Related KEGG Pathway | |||||||||
Nucleocytoplasmic transport | hsa03013 | Pathway Map | |||||||
mRNA surveillance pathway | hsa03015 | Pathway Map | |||||||
3D Structure |
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Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: Not Specified Virus Region (hCoV-19/England/02/2020 ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [5] | |||||||
Strains Name |
hCoV-19/England/02/2020
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Strains Family |
Beta (B.1.351)
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RNA Binding Region |
Not Specified Virus Region
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Calu-3 cells (Human lung cancer cell) (CVCL_0609 ) | ||||||||
Cell Originated Tissue | Lung | ||||||||
Infection Time | 24 h | ||||||||
Interaction Score | P-adjust = 0.029 | ||||||||
Method Description | UV protein-RNA crosslinking; RNA interactome capture (cRIC); RNA antisense purification coupled with mass spectrometry (RAP-MS) |