Host Protein General Information (ID: PT0655)
  Protein Name
mRNA decay activator protein ZFP36L2 (ZFP36L2)
  Gene Name
ZFP36L2
  Host Species
Homo sapiens
  Uniprot Entry Name
TISD_HUMAN
  Subcellular Location
Nucleus Cytoplasm
  External Link
NCBI Gene ID
678
Uniprot ID
P47974
Ensembl ID
ENSG00000152518
HGNC ID
HGNC:1108
  Function in Host
Zinc-finger RNA-binding protein that destabilizes severalcytoplasmic AU-rich element (ARE) -containing mRNA transcripts bypromoting their poly (A) tail removal or deadenylation, and henceprovide a mechanism for attenuating protein synthesis. Acts as a 3'-untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNAdecay machinery. Functions by recruiting the CCR4-NOTdeadenylase complex and probably other components of the cytoplasmicRNA decay machinery to the bound ARE-containing mRNAs, and hencepromotes ARE-mediated mRNA deadenylation and decay processes. Binds to 3'-UTR ARE of numerous mRNAs. Promotes ARE-containing mRNA decay of the low-density lipoprotein (LDL) receptor (LDLR) mRNA in response to phorbol 12-myristate 13-acetate (PMA) treatment in a p38 MAPK-dependent manner. Positivelyregulates early adipogenesis by promoting ARE-mediated mRNA decay ofimmediate early genes (IEGs). Plays a role in mature peripheral neuronintegrity by promoting ARE-containing mRNA decay of the transcriptionalrepressor REST mRNA. Plays a role in ovulation and oocyte meioticmaturation by promoting ARE-mediated mRNA decay of the luteinizinghormone receptor LHCGR mRNA. Acts as a negative regulator of erythroidcell differentiation: promotes glucocorticoid-induced self-renewal oferythroid cells by binding mRNAs that are induced or highly expressedduring terminal erythroid differentiation and promotes theirdegradation, preventing erythroid cell differentiation. In associationwith ZFP36L1 maintains quiescence on developing B lymphocytes bypromoting ARE-mediated decay of several mRNAs encoding cell cycleregulators that help B cells progress through the cell cycle, and henceensuring accurate variable-diversity-joining (VDJ) recombinationprocess and functional immune cell formation. Together with ZFP36L1 isalso necessary for thymocyte development and prevention of T-cell acutelymphoblastic leukemia (T-ALL) transformation by promoting ARE-mediatedmRNA decay of the oncogenic transcription factor NOTCH1 mRNA. [1-3]
    Click to Show/Hide
  Related KEGG Pathway
Cellular senescence hsa04218            Pathway Map 
  3D Structure

Function of This Protein During Virus Infection
Virus NameSARS-COV-2 Protein Function Anti-viral [4]
Infected TissueLung Infection Time7-9 Days
Infected CellCalu-3 Cells (Human epithelial cell line) Cellosaurus IDCVCL_0609 
Method DescriptionTo detect the role of host protein ZFP36L2 in viral infection, ZFP36L2 protein knockout Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen.
ResultsIt is reported that knockout of ZFP36L2 increases SARS-CoV-2 RNA levels compared with control group.

 Full List of Virus RNA Interacting with This Protien
            RNA Region: Not Specified Virus Region (hCoV-19/England/02/2020 )
              RNA Region Details RNA Info Click to show the detail information of this RNA binding region [5]
              Strains Name
hCoV-19/England/02/2020
              Strains Family
Beta (B.1.351)
              RNA Binding Region
Not Specified Virus Region
              Virus Name
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
              Infection Cells Calu-3 cells (Human lung cancer cell)  (CVCL_0609 )
              Cell Originated Tissue Lung
              Infection Time 24 h
              Interaction Score P-adjust = 0.001
              Method Description UV protein-RNA crosslinking; RNA interactome capture (cRIC); RNA antisense purification coupled with mass spectrometry (RAP-MS)

Differential Gene Expression During SARS-COV-2 Infection
GEO Accession: GSE152641
Sample Type: Blood
Samples Details: Healthy Control: 24; COVID-19: 62
Platform: GPL24676 Illumina NovaSeq 6000
Picture Not Found

GEO Accession: GSE162835
Sample Type: Nasopharyngeal Swabs
Samples Details: COVID-19 (Mild Symptoms): 37; COVID-19 (Moderate Symptoms): 10; COVID-19 (Severe Symptoms): 3
Platform: GPL24676 Illumina NovaSeq 6000
Picture Not Found

GEO Accession: GSE175779
Sample Type: Human Bronchial Epithelial Cells
Samples Details: Healthy Control: 4 (0, 24, 48, 72 and 96 h); COVID-19: 4 (24, 48, 72 and 96 h)
Platform: GPL18573 Illumina NextSeq 500
Picture Not Found

Protein Phosphorylation after Virus Infection
S125 [6]
Picture Not Found
S259 [6]
Picture Not Found
S261 [6]
Picture Not Found
S265 [6]
Picture Not Found
S276 [6]
Picture Not Found
S426 [6]
Picture Not Found
S57 [6]
Picture Not Found
S59 [6]
Picture Not Found
S73 [6]
Picture Not Found
S75 [6]
Picture Not Found

Protein Sequence Information
MSTTLLSAFYDVDFLCKTEKSLANLNLNNMLDKKAVGTPVAAAPSSGFAPGFLRRHSASNLHALAHPAPSPGSCSPKFPGAANGSSCGSAAAGGPTSYGTLKEPSGGGGTALLNKENKFRDRSFSENGDRSQHLLHLQQQQKGGGGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFGTRDALHLGFPREPRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSASSCSSSASSCSSASAASTPSGAPTCCASAAAAAAAALLYGTGGAEDLLAPGAPCAACSSASCANNAFAFGPELSSLITPLAIQTHNFAAVAAAAYYRSQQQQQQQGLAPPAQPPAPPSATLPAGAAAPPSPPFSFQLPRRLSDSPVFDAPPSPPDSLSDRDSYLSGSLSSGSLSGSESPSLDPGRRLPIFSRLSISDD
    Click to Show/Hide

References
1 ZFP36L1 and ZFP36L2 control LDLR mRNA stability via the ERK-RSK pathway. Nucleic Acids Res. 2014 Sep;42(15):10037-49.
2 A computational study of RNA binding and specificity in the tandem zinc finger domain of TIS11d. Protein Sci. 2010 Jun;19(6):1222-34.
3 Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d. Nat Struct Mol Biol. 2004 Mar;11(3):257-64.
4 Genome-wide CRISPR screens identify GATA6 as a proviral host factor for SARS-CoV-2 via modulation of ACE2. Nat Commun. 2022 Apr 25;13(1):2237.
5 Global analysis of protein-RNA interactions in SARS-CoV-2-infected cells reveals key regulators of infection. Mol Cell. 2021 Jul 1;81(13):2851-2867.e7.
6 Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV. Nature. 2021 Jun;594(7862):246-252.