Details of Host Protein
Host Protein General Information (ID: PT0805) | |||||||||
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Protein Name |
ALG-2-interacting protein 1 (PDCD6IP)
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Gene Name |
PDCD6IP
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Host Species |
Homo sapiens
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Uniprot Entry Name |
PDC6I_HUMAN
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Subcellular Location |
Cytoplasm; cytosol Melanosome Cytoplasm
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External Link | |||||||||
NCBI Gene ID | |||||||||
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Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
Multifunctional protein involved in endocytosis, multivesicular body biogenesis, membrane repair, cytokinesis, apoptosisand maintenance of tight junction integrity. Class E VPS proteininvolved in concentration and sorting of cargo proteins of themultivesicular body (MVB) for incorporation into intralumenal vesicles (ILVs) that are generated by invagination and scission from thelimiting membrane of the endosome. Binds to the phospholipidlysobisphosphatidic acid (LBPA) which is abundant in MVBs internalmembranes. The MVB pathway requires the sequential function of ESCRT-O, -I, -II and -III complexes. The ESCRT machinery alsofunctions in topologically equivalent membrane fission events, such asthe terminal stages of cytokinesis. Adapter for a subset of ESCRT-III proteins, such as CHMP4, to functionat distinct membranes. Required for completion of cytokinesis. May play a role inthe regulation of both apoptosis and cell proliferation. Regulatesexosome biogenesis in concert with SDC1/4 and SDCBP. By interacting with F-actin, PARD3 and TJP1 secures the proper assemblyand positioning of actomyosin-tight junction complex at the apicalsides of adjacent epithelial cells that defines a spatial membranedomain essential for the maintenance of epithelial cell polarity andbarrier.
[1-5]
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Related KEGG Pathway | |||||||||
Viral life cycle - HIV-1 | hsa03250 |
Pathway Map ![]() |
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Endocytosis | hsa04144 |
Pathway Map ![]() |
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3D Structure |
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Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: Not Specified Virus Region (hCoV-19/USA/WA1/2020 ) | |||||||||
RNA Region Details |
RNA Info
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[6] | |||||||
Strains Name |
hCoV-19/USA/WA1/2020
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Strains Family |
Alpha (B.1.1.7)
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RNA Binding Region |
Not Specified Virus Region
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Huh7.5 cells (Hepatocyte derived cellular carcinoma cell) (CVCL_7927 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Infection Time | 48 h | ||||||||
Interaction Score | FDR ≤ 0.05 | ||||||||
Method Description | comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS) |
Differential Gene Expression During SARS-COV-2 Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Protein Phosphorylation after Virus Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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S729
[7] |
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S730
[7] |
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T738
[7] |
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Protein Sequence Information |
MATFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLFEKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPSANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQQ
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