Details of Host Protein
Host Protein General Information (ID: PT0908) | |||||||||
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Protein Name |
Ras-related protein Rab-10 (RAB10)
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Gene Name |
RAB10
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Host Species |
Homo sapiens
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Uniprot Entry Name |
RAB10_HUMAN
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Protein Families |
Small GTPase superfamily
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EC Number |
3.6.5.2
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Subcellular Location |
Endosome; Endoplasmic reticulum
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External Link | |||||||||
NCBI Gene ID | |||||||||
Uniprot ID | |||||||||
Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
The small GTPases Rab are key regulators of intracellularmembrane trafficking, from the formation of transport vesicles to theirfusion with membranes. Rabs cycle between an inactiveGDP-bound form and an active GTP-bound form that is able to recruit tomembranes different set of downstream effectors directly responsiblefor vesicle formation, movement, tethering and fusion. That Rab is mainly involved in the biosynthetictransport of proteins from the Golgi to the plasma membrane. Regulates, for instance, SLC2A4/GLUT4 glucosetransporter-enriched vesicles delivery to the plasma membrane. In parallel, it regulates the transport of TLR4, a toll-like receptor to the plasma membrane and therefore may be important forinnate immune response. Plays also a specific role inasymmetric protein transport to the plasma membrane. In neurons, it is involved in axonogenesis through regulation ofvesicular membrane trafficking toward the axonal plasma membrane. In epithelial cells, it regulates transport from the Golgito the basolateral membrane. May play a role in thebasolateral recycling pathway and in phagosome maturation. May play a role in endoplasmic reticulum dynamics andmorphology controlling tubulation along microtubules and tubules fusion. Together with LRRK2, RAB8A, and RILPL1, it regulatesciliogenesis. When phosphorylated by LRRK2 on Thr-73, binds RILPL1 and inhibits ciliogenesis.
[1-2]
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Related KEGG Pathway | |||||||||
Endocytosis | hsa04144 |
Pathway Map ![]() |
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AMPK signaling pathway | hsa04152 |
Pathway Map ![]() |
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3D Structure |
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Function of This Protein During Virus Infection | |||||||||
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Virus Name | HCoV-229E | Protein Function | Pro-viral | [3] | |||||
Infected Tissue | Liver | Infection Time | 24 h | ||||||
Infected Cell | Huh-7.5 Cells (Human hepatocellular carcinoma cells) | Cellosaurus ID | CVCL_7927 | ||||||
Method Description | To detect the role of host protein RAB10 in viral infection, RAB10 protein knockout Huh-7.5 Cells were infected with HCoV-229E for 24 , and the effects on infection was detected through qRT-PCR. | ||||||||
Results | It is reported that knockdown of RAB10 leads to the reduced SARS-CoV-2 RNA levels compared with control group. | ||||||||
Virus Name | HCoV-OC43 | Protein Function | Pro-viral | [3] | |||||
Infected Tissue | Liver | Infection Time | 24 h | ||||||
Infected Cell | Huh-7.5 Cells (Human hepatocellular carcinoma cells) | Cellosaurus ID | CVCL_7927 | ||||||
Method Description | To detect the role of host protein RAB10 in viral infection, RAB10 protein knockout Huh-7.5 Cells were infected with HCoV-OC43 for 24 , and the effects on infection was detected through qRT-PCR. | ||||||||
Results | It is reported that knockdown of RAB10 leads to the reduced SARS-CoV-2 RNA levels compared with control group. | ||||||||
Virus Name | SARS-COV-2 | Protein Function | Pro-viral | [3] | |||||
Infected Tissue | Liver | Infection Time | 24 h | ||||||
Infected Cell | Huh-7.5 Cells (Human hepatocellular carcinoma cell) | Cellosaurus ID | CVCL_7927 | ||||||
Method Description | To detect the role of host protein RAB10 in viral infection, RAB10 protein knockout Huh-7.5 Cells were infected with SARS-COV-2 for 24 , and the effects on infection was detected through qRT-PCR. | ||||||||
Results | It is reported that knockdown of RAB10 leads to the reduced SARS-CoV-2 RNA levels compared with control group. |
Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: Not Specified Virus Region (hCoV-19/USA/WA1/2020 ) | |||||||||
RNA Region Details |
RNA Info
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[4] | |||||||
Strains Name |
hCoV-19/USA/WA1/2020
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Strains Family |
Alpha (B.1.1.7)
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RNA Binding Region |
Not Specified Virus Region
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Huh7.5 cells (Hepatocyte derived cellular carcinoma cell) (CVCL_7927 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Infection Time | 48 h | ||||||||
Interaction Score | FDR ≤ 0.05 | ||||||||
Method Description | comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS) |
Differential Gene Expression During SARS-COV-2 Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Protein Phosphorylation after Virus Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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T73
[5] |
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Protein Sequence Information |
MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVTGWKSKCC
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