Details of Host Protein
Host Protein General Information (ID: PT0925) | |||||||||
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Protein Name |
Rho guanine nucleotide exchange factor 2 (C7orf25)
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Gene Name |
ARHGEF2
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Host Species |
Homo sapiens
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Uniprot Entry Name |
ARHG2_HUMAN
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Subcellular Location |
Cytoplasm; cytoskeleton Cytoplasm Cell junction
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External Link | |||||||||
NCBI Gene ID | |||||||||
Uniprot ID | |||||||||
Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
Activates Rho-GTPases by promoting the exchange of GDP forGTP. May be involved in epithelial barrier permeability, cell motilityand polarization, dendritic spine morphology, antigen presentation, leukemic cell differentiation, cell cycle regulation, innate immuneresponse, and cancer. Binds Rac-GTPases, but does not seem to promotenucleotide exchange activity toward Rac-GTPases, which was uniquelyreported in. May stimulate instead the cortical activityof Rac. Inactive toward CDC42, TC10, or Ras-GTPases. Forms anintracellular sensing system along with NOD1 for the detection ofmicrobial effectors during cell invasion by pathogens. Required forRHOA and RIP2 dependent NF-kappaB signaling pathways activation uponS. flexneri cell invasion. Involved not only in sensing peptidoglycan (PGN) -derived muropeptides through NOD1 that is independent of its GEFactivity, but also in the activation of NF-kappaB by Shigella effectorproteins (IpgB2 and OspB) which requires its GEF activity and theactivation of RhoA. Involved in innate immune signaling transductionpathway promoting cytokine IL6/interleukin-6 and TNF-alpha secretion inmacrophage upon stimulation by bacterial peptidoglycans; acts as asignaling intermediate between NOD2 receptor and RIPK2 kinase. Contributes to the tyrosine phosphorylation of RIPK2 through Srctyrosine kinase leading to NF-kappaB activation by NOD2. Overexpressionactivates Rho-, but not Rac-GTPases, and increases paracellularpermeability. Involved in neuronal progenitor celldivision and differentiation. Involved in themigration of precerebellar neurons.
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Related KEGG Pathway | |||||||||
Pathogenic Escherichia coli infection | hsa05130 | Pathway Map | |||||||
Shigellosis | hsa05131 | Pathway Map | |||||||
Tight junction | hsa04530 | Pathway Map | |||||||
Fluid shear stress and atherosclerosis | hsa05418 | Pathway Map | |||||||
3D Structure |
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Function of This Protein During Virus Infection | |||||||||
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Virus Name | SARS-COV-2 | Protein Function | Anti-viral | [1] | |||||
Infected Tissue | Lung | Infection Time | 7-9 Days | ||||||
Infected Cell | Calu-3 Cells (Human epithelial cell line) | Cellosaurus ID | CVCL_0609 | ||||||
Method Description | To detect the role of host protein ARHGEF2 in viral infection, ARHGEF2 protein Knockdown Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen. | ||||||||
Results | It is reported that knockout of ARHGEF2 increases SARS-CoV-2 RNA levels compared with control group. |
Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: 5'-UTR (hCoV-19/Wuhan-Hu-1/2019 ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [2] | |||||||
Strains Name |
hCoV-19/Wuhan-Hu-1/2019
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Strains Family |
Beta (B.1.351)
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RNA Binding Region |
5'-UTR
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | HEK293 Cells (Human embryonic kidney cell) (CVCL_0045 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Infection Time | 48 h | ||||||||
Interaction Score | Prot score = 18 | ||||||||
Method Description | RNA-protein interaction detection (RaPID) assay; liquid chromatography with tandem mass spectrometry (LC-MS/MS) |
Differential Gene Expression During SARS-COV-2 Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Protein Phosphorylation after Virus Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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S151
[3] |
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S151
[4] |
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S163
[4] |
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S174
[3] |
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S174
[4] |
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S645
[3] |
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S645
[4] |
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S691
[4] |
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S696
[4] |
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S782
[3] |
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S886
[4] |
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S932
[3] |
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S932
[4] |
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T679
[4] |
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T695
[4] |
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Y894
[4] |
Protein Sequence Information |
MSRIESLTRARIDRSRELASKTREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTIRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDESPLGLRRILSQSTDSLNMRNRTLSVESLIDEAEVIYSELMSDFEMDEKDFAADSWSLAVDSSFLQQHKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELHLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALCPGSTRNFVIHRLGDLLISQFSGPSAEQMCKTYSEFCSRHSKALKLYKELYARDKRFQQFIRKVTRPAVLKRHGVQECILLVTQRITKYPLLISRILQHSHGIEEERQDLTTALGLVKELLSNVDEGIYQLEKGARLQEIYNRMDPRAQTPVPGKGPFGREELLRRKLIHDGCLLWKTATGRFKDVLVLLMTDVLVFLQEKDQKYIFPTLDKPSVVSLQNLIVRDIANQEKGMFLISAAPPEMYEVHTASRDDRSTWIRVIQQSVRTCPSREDFPLIETEDEAYLRRIKMELQQKDRALVELLREKVGLFAEMTHFQAEEDGGSGMALPTLPRGLFRSESLESPRGERLLQDAIREVEGLKDLLVGPGVELLLTPREPALPLEPDSGGNTSPGVTANGEARTFNGSIELCRADSDSSQRDRNGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARFPEGPERREKLCRANSRDGEAGRAGAAPVAPEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQARALLEREAEEARRQLAALGQTEPLPAEAPWARRPVDPRRRSLPAGDALYLSFNPPQPSRGTDRLDLPVTTRSVHRNFEDRERQELGSPEERLQDSSDPDTGSEEEGSSRLSPPHSPRDFTRMQDIPEETESRDGEAVASES
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