Host Protein General Information (ID: PT0501)
  Protein Name
Heat shock 70 kDa protein 1B (HSPA1B)
  Gene Name
HSPA1B
  Host Species
Homo sapiens
  Uniprot Entry Name
HS71B_HUMAN
  Protein Families
Heat shock protein 7. family
  Subcellular Location
Cytoplasm; cytoskeleton; microtubule organizing center
  External Link
NCBI Gene ID
3303
Uniprot ID
P0DMV9
Ensembl ID
ENSG00000204388
HGNC ID
HGNC:5233
  Function in Host
Molecular chaperone implicated in a wide variety of cellularprocesses, including protection of the proteome from stress, foldingand transport of newly synthesized polypeptides, activation ofproteolysis of misfolded proteins and the formation and dissociation ofprotein complexes. Plays a pivotal role in the protein quality controlsystem, ensuring the correct folding of proteins, the re-folding ofmisfolded proteins and controlling the targeting of proteins forsubsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis and ADP release, mediated by co-chaperones. The co-chaperones have been shown to not only regulate different steps of theATPase cycle, but they also have an individual specificity such thatone co-chaperone may promote folding of a substrate while another maypromote degradation. The affinity for polypeptides is regulated by itsnucleotide bound state. In the ATP-bound form, it has a low affinityfor substrate proteins. However, upon hydrolysis of the ATP to ADP, itundergoes a conformational change that increases its affinity forsubstrate proteins. It goes through repeated cycles of ATP hydrolysisand nucleotide exchange, which permits cycles of substrate binding andrelease. The co-chaperones are of three types: J-domain co-chaperonessuch as HSP40s (stimulate ATPase hydrolysis by HSP70), the nucleotideexchange factors (NEF) such as BAG1/2/3 (facilitate conversion of HSP70from the ADP-bound to the ATP-bound state thereby promoting substraterelease), and the TPR domain chaperones such as HOPX and STUB1. Maintains proteinhomeostasis during cellular stress through two opposing mechanisms:protein refolding and degradation. Its acetylation/deacetylation statedetermines whether it functions in protein refolding or proteindegradation by controlling the competitive binding of co-chaperonesHOPX and STUB1. During the early stress response, the acetylated formbinds to HOPX which assists in chaperone-mediated protein refolding, thereafter, it is deacetylated and binds to ubiquitin ligase STUB1 thatpromotes ubiquitin-mediated protein degradation. Regulates centrosome integrity during mitosis, and is required for themaintenance of a functional mitotic centrosome that supports theassembly of a bipolar mitotic spindle. EnhancesSTUB1-mediated SMAD3 ubiquitination and degradation and facilitatesSTUB1-mediated inhibition of TGF-beta signaling. Essential for STUB1-mediated ubiquitination and degradation of FOXP3 inregulatory T-cells (Treg) during inflammation. [1-3]
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  Related KEGG Pathway
Antigen processing and presentation hsa04612            Pathway Map 
Measles hsa05162            Pathway Map 
Legionellosis hsa05134            Pathway Map 
Toxoplasmosis hsa05145            Pathway Map 
Protein processing in endoplasmic reticulum hsa04141            Pathway Map 
Spliceosome hsa03040            Pathway Map 
MAPK signaling pathway hsa04010            Pathway Map 
Endocytosis hsa04144            Pathway Map 
Prion disease hsa05020            Pathway Map 
  3D Structure

Function of This Protein During Virus Infection
Virus NameSARS-COV-2 Protein Function Anti-viral [4]
Infected TissueLung Infection Time7-9 Days
Infected CellCalu-3 Cells (Human epithelial cell line) Cellosaurus IDCVCL_0609 
Method DescriptionTo detect the role of host protein HSPA1B in viral infection, HSPA1B protein knockout Calu-3 Cells were infected with SARS-COV-2 for 7 - 9 Days , and the effects on infection was detected through CRISPR-based genome-wide gene-knockout screen.
ResultsIt is reported that knockout of HSPA1B increases SARS-CoV-2 RNA levels compared with control group.

Host Protein - Virus RNA Network

 Full List of Virus RNA Interacting with This Protien
            RNA Region: ORF10 (hCoV-19/Not Specified Virus Strain )
              RNA Region Details RNA Info Click to show the detail information of this RNA binding region [5]
              Strains Name
hCoV-19/Not Specified Virus Strain
              RNA Binding Region
ORF10
              Virus Name
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
              Infection Cells Calu-3 cells (Human Lung Cancer Cell)  (CVCL_0609 )
              Cell Originated Tissue Liver
              Interaction Score P-value < 0.05
              Method Description RNA pull-down assays; liquid chromatography with tandem mass spectrometry (LC-MS/MS); Wilcoxon test; MS2 affinity purification coupled with liquid chromatography-mass spectrometry (MAMS)
           RNA Region: Not Specified Virus Region (hCoV-19/England/02/2020 )
              RNA Region Details RNA Info Click to show the detail information of this RNA binding region [6]
              Strains Name
hCoV-19/England/02/2020
              Strains Family
Beta (B.1.351)
              RNA Binding Region
Not Specified Virus Region
              Virus Name
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
              Infection Cells Calu-3 cells (Human lung cancer cell) Calu-3 cells (Human lung cancer cell)  (CVCL_0609 )
              Cell Originated Tissue Lung
              Infection Time 24 h
              Interaction Score P-adjust = 0.031
              Method Description UV protein-RNA crosslinking; RNA interactome capture (cRIC); RNA antisense purification coupled with mass spectrometry (RAP-MS)

Differential Gene Expression During SARS-COV-2 Infection
GEO Accession: GSE152641
Sample Type: Blood
Samples Details: Healthy Control: 24; COVID-19: 62
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE162835
Sample Type: Nasopharyngeal Swabs
Samples Details: COVID-19 (Mild Symptoms): 37; COVID-19 (Moderate Symptoms): 10; COVID-19 (Severe Symptoms): 3
Platform: GPL24676 Illumina NovaSeq 6000
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GEO Accession: GSE175779
Sample Type: Human Bronchial Epithelial Cells
Samples Details: Healthy Control: 4 (0, 24, 48, 72 and 96 h); COVID-19: 4 (24, 48, 72 and 96 h)
Platform: GPL18573 Illumina NextSeq 500
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Protein Sequence Information
MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD
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References
1 Hsp70 and Hsp90 oppositely regulate TGF-B signaling through CHIP/Stub1. Biochem Biophys Res Commun. 2014 Mar 28;446(1):387-92.
2 HSP70 regulates the function of mitotic centrosomes. Cell Mol Life Sci. 2016 Oct;73(20):3949-60.
3 ARD1-mediated Hsp70 acetylation balances stress-induced protein refolding and degradation. Nat Commun. 2016 Oct 6;7:12882.
4 Genome-wide CRISPR screens identify GATA6 as a proviral host factor for SARS-CoV-2 via modulation of ACE2. Nat Commun. 2022 Apr 25;13(1):2237.
5 Mapping the host protein interactome of non-coding regions in SARS-CoV-2 genome. bioRxiv. 2021 Jun; DOI:10.1101/2021.06.19.449092.
6 Global analysis of protein-RNA interactions in SARS-CoV-2-infected cells reveals key regulators of infection. Mol Cell. 2021 Jul 1;81(13):2851-2867.e7.