Details of Host Protein
| Host Protein General Information (ID: PT0718) | |||||||||
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| Protein Name |
Rotamase A (PPIA)
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Gene Name |
PPIA
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| Host Species |
Homo sapiens
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Uniprot Entry Name |
PPIA_HUMAN
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| Protein Families |
Cyclophilin-type PPIase family
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| EC Number |
5.2.1.8
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| Subcellular Location |
Cytoplasm Secreted Nucleus
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| External Link | |||||||||
| NCBI Gene ID | |||||||||
| Uniprot ID | |||||||||
| Ensembl ID | |||||||||
| HGNC ID | |||||||||
| Function in Host |
Catalyzes the cis-trans isomerization of proline imidicpeptide bonds in oligopeptides. Exerts a strongchemotactic effect on leukocytes partly through activation of one ofits membrane receptors BSG/CD147, initiating a signaling cascade thatculminates in MAPK/ERK activation. Activates endothelial cells (ECs) in a pro-inflammatory manner bystimulating activation of NF-kappa-B and ERK, JNK and p38 MAP-kinasesand by inducing expression of adhesion molecules including SELE andVCAM1. Induces apoptosis in ECs by promoting theFOXO1-dependent expression of CCL2 and BCL2L11 which are involved in ECchemotaxis and apoptosis. In response to oxidativestress, initiates proapoptotic and antiapoptotic signaling in ECs viaactivation of NF-kappa-B and AKT1 and up-regulation of antiapoptoticprotein BCL2. Negatively regulates MAP3K5/ASK1 kinaseactivity, autophosphorylation and oxidative stress-induced apoptosismediated by MAP3K5/ASK1. Necessary for the assemblyof TARDBP in heterogeneous nuclear ribonucleoprotein (hnRNP) complexesand regulates TARDBP binding to RNA UG repeats and TARDBP-dependentexpression of HDAC6, ATG7 and VCP which are involved in clearance ofprotein aggregates. Plays an important role inplatelet activation and aggregation. Regulates calciummobilization and integrin ITGA2B:ITGB3 bidirectional signaling viaincreased ROS production as well as by facilitating the interactionbetween integrin and the cell cytoskeleton. Bindsheparan sulfate glycosaminoglycans. Inhibitsreplication of influenza A virus (IAV). InhibitsITCH/AIP4-mediated ubiquitination of matrix protein 1 (M1) of IAV byimpairing the interaction of ITCH/AIP4 with M1, followed by thesuppression of the nuclear export of M1, and finally reduction of thereplication of IAV.
[1-8]
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| Related KEGG Pathway | |||||||||
| Viral life cycle - HIV-1 | hsa03250 |
Pathway Map
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| Necroptosis | hsa04217 |
Pathway Map
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| 3D Structure |
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| Function of This Protein During Virus Infection | |||||||||
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| Virus Name | SARS-COV-2 | Protein Function | Anti-viral | [9] | |||||
| Infected Tissue | Lung | Infection Time | 24 h | ||||||
| Infected Cell | A549 Cells (Adenocarcinomic Human alveolar basal epithelial cells) | Cellosaurus ID | CVCL_H249 | ||||||
| Method Description | To detect the role of host protein PPIA in viral infection, PPIA protein knockout A549 Cells were infected with SARS-COV-2 for 24 h , and the effects on infection was detected through qRT-PCR. | ||||||||
| Results | It is reported that Knockdown of PPIA increases viral particles production compared with control group. | ||||||||
| Host Protein - Virus RNA Network | |||||||||
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| Full List of Virus RNA Interacting with This Protien | |||||||||
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| RNA Region: 3'-UTR (hCoV-19/IPBCAMS-YL01/2020 ) | |||||||||
| RNA Region Details |
RNA Info
Click to show the detail information of this RNA binding region
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[10] | |||||||
| Strains Name |
hCoV-19/IPBCAMS-YL01/2020
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| Strains Family |
Beta (B.1.351)
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| RNA Binding Region |
3'-UTR
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| Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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| Interaction Type | Unlikely to be direct binder | ||||||||
| Infection Cells | Huh7.5.1 cells (Hepatocyte derived cellular carcinoma cell) (CVCL_E049 ) | ||||||||
| Cell Originated Tissue | Liver | ||||||||
| Infection Time | 30 h | ||||||||
| Interaction Score | MIST = 0.990602192 | ||||||||
| Method Description | comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS) | ||||||||
| RNA Region: Not Specified Virus Region (hCoV-19/Not Specified Virus Strain ) | |||||||||
| RNA Region Details |
RNA Info
Click to show the detail information of this RNA binding region
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[11] | |||||||
| Strains Name |
hCoV-19/Not Specified Virus Strain
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| RNA Binding Region |
Not Specified Virus Region
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| Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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| Infection Cells | Huh7 cells (liver carcinoma cell) Huh7 cells (liver carcinoma cell) (CVCL_0336 ) | ||||||||
| Cell Originated Tissue | Liver | ||||||||
| Infection Time | 24h | ||||||||
| Interaction Score | log2FC = 8.76745E+13 | ||||||||
| Method Description | RNA antisense purification and quantitative mass spectrometry (RAP-MS); Tandem mass tag (TMT) labelling; liquid chromatography tandem mass spectrometry (LC-MS/MS); Westernblot | ||||||||
| RNA Region: Not Specified Virus Region (hCoV-19/France/IDF-220-95/2020 ) | |||||||||
| RNA Region Details |
RNA Info
Click to show the detail information of this RNA binding region
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[9] | |||||||
| Strains Name |
hCoV-19/France/IDF-220-95/2020
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| RNA Binding Region |
Not Specified Virus Region
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| Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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| Interaction Type | Direct interaction | ||||||||
| Infection Cells | HEK293 Cells (Human embryonic kidney cell) HEK293 Cells (Human embryonic kidney cell) (CVCL_0045 ) | ||||||||
| Cell Originated Tissue | Kidney | ||||||||
| Infection Time | 48 h | ||||||||
| Interaction Score | SAINT score ≥ 0.79 | ||||||||
| Method Description | comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS) | ||||||||
| RNA Region: Not Specified Virus Region (hCoV-19/England/02/2020 ) | |||||||||
| RNA Region Details |
RNA Info
Click to show the detail information of this RNA binding region
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[12] | |||||||
| Strains Name |
hCoV-19/England/02/2020
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| Strains Family |
Beta (B.1.351)
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| RNA Binding Region |
Not Specified Virus Region
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| Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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| Infection Cells | Calu-3 cells (Human lung cancer cell) Calu-3 cells (Human lung cancer cell) (CVCL_0609 ) | ||||||||
| Cell Originated Tissue | Lung | ||||||||
| Infection Time | 24 h | ||||||||
| Interaction Score | P-adjust = 0.012 | ||||||||
| Method Description | UV protein-RNA crosslinking; RNA interactome capture (cRIC); RNA antisense purification coupled with mass spectrometry (RAP-MS) | ||||||||
| Differential Gene Expression During SARS-COV-2 Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Protein Phosphorylation after Virus Infection | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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S147
[13] |
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S51
[13] |
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| Potential Drug(s) that Targets This Protein | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Drug Name | DrunkBank ID | Pubchem ID | TTD ID | REF | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CYCLOSPORINE | DB00091 | 5284373 | D0O3YF | [14], [15], [10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Indinavir | DB00224 | 5362440 | D0V7CF | [10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ribavirin | DB00811 | 37542 | D0H3WI | [10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Zidovudine | DB00495 | 35370 | D01XYJ | [10] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence Information |
MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
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