Details of Host Protein
Host Protein General Information (ID: PT1003) | |||||||||
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Protein Name |
RuvB-like 1 (EIF5A)
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Gene Name |
RUVBL1
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Host Species |
Homo sapiens
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Uniprot Entry Name |
RUVB1_HUMAN
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Protein Families |
RuvB family
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EC Number |
3.6.4.12
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Subcellular Location |
Nucleus matrix
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External Link | |||||||||
NCBI Gene ID | |||||||||
Uniprot ID | |||||||||
Ensembl ID | |||||||||
HGNC ID | |||||||||
Function in Host |
Possesses single-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (3' to 5') activity; hexamerization is thoughtto be critical for ATP hydrolysis and adjacent subunits in the ring-like structure contribute to the ATPase activity. Component of the NuA4 histone acetyltransferasecomplex which is involved in transcriptional activation of select genesprincipally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome-DNAinteractions and promote interaction of the modified histones withother proteins which positively regulate transcription. This complex may be required for the activation oftranscriptional programs associated with oncogene and proto-oncogenemediated growth induction, tumor suppressor mediated growth arrest andreplicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least inpart, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when recruited to sitesof DNA damage. Component of a SWR1-like complex thatspecifically mediates the removal of histone H2A. Z/H2AZ1 from thenucleosome. Proposed core component of the chromatinremodeling INO80 complex which exhibits DNA- and nucleosome-activatedATPase activity and catalyzes ATP-dependent nucleosome sliding. Plays an essential role inoncogenic transformation by MYC and also modulates transcriptionalactivation by the LEF1/TCF1-CTNNB1 complex. Essential for cell proliferation. May be able to bind plasminogen at cell surface and enhance plasminogenactivation.
[1-3]
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Related KEGG Pathway | |||||||||
Wnt signaling pathway | hsa04310 | Pathway Map | |||||||
3D Structure |
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Host Protein - Virus RNA Network | |||||||||
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Full List of Virus RNA Interacting with This Protien | |||||||||
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RNA Region: ORF10 (hCoV-19/Not Specified Virus Strain ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [4] | |||||||
Strains Name |
hCoV-19/Not Specified Virus Strain
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RNA Binding Region |
ORF10
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Huh7 cells (human liver cell line) (CVCL_0336 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Interaction Score | P-value < 0.05 | ||||||||
Method Description | RNA pull-down assays; liquid chromatography with tandem mass spectrometry (LC-MS/MS); Wilcoxon test; MS2 affinity purification coupled with liquid chromatography-mass spectrometry (MAMS) | ||||||||
RNA Region: Not Specified Virus Region (hCoV-19/USA/WA1/2020 ) | |||||||||
RNA Region Details | RNA Info Click to show the detail information of this RNA binding region | [5] | |||||||
Strains Name |
hCoV-19/USA/WA1/2020
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Strains Family |
Alpha (B.1.1.7)
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RNA Binding Region |
Not Specified Virus Region
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Virus Name |
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
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Infection Cells | Huh7.5 cells (Hepatocyte derived cellular carcinoma cell) Huh7.5 cells (Hepatocyte derived cellular carcinoma cell) (CVCL_7927 ) | ||||||||
Cell Originated Tissue | Liver | ||||||||
Infection Time | 48 h | ||||||||
Interaction Score | FDR ≤ 0.05 | ||||||||
Method Description | comprehensive identification of RNA-binding proteins by massspectrometry (ChIRP-MS) |